From RNA-seq to large-scale genotyping - genomics resources for rye (Secale cereale L.)

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Towards a whole-genome sequence for rye (Secale cereale L.).

We report on a whole-genome draft sequence of rye (Secale cereale L.). Rye is a diploid Triticeae species closely related to wheat and barley, and an important crop for food and feed in Central and Eastern Europe. Through whole-genome shotgun sequencing of the 7.9-Gbp genome of the winter rye inbred line Lo7 we obtained a de novo assembly represented by 1.29 million scaffolds covering a total l...

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Trace Elements Species Fractionation in Rye Flour and Rye (Secale cereale L.) Seedlings

Polák J., Mestek O., Koplík R., Šantrůček J., Komínková J., Kodíček M. (2009): Trace elements species fractionation in rye flour and rye (Secale cereale L.) seedlings. Czech J. Food Sci., 27: 39–48. The fractionation of Cd, Cu, Mo, Ni, and Zn species in extracts of rye (cv. Fernando) seedlings (grown up in both standard and Cd2+-enriched medium) and rye flour was performed by SEC/ICP−MS method....

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The Ph1 locus from wheat controls meiotic chromosome pairing in autotetraploid rye (Secale cereale L.).

The Ph1 locus on chromosome 5B enforces strictly bivalent pairing in polyploid wheat, but the exact mechanism of its action remains unknown. Pairing restriction involves not only wheat homoeologues and all alien introgressions but also differentiated homologues. In this study we show that chromosome 5B with its Ph1 locus also controls chromosome pairing in autotetraploid rye by apparently restr...

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Cyanidin 3-Gentiobioside from Primary Leaves of Rye (Secale cereale L.)

Primary leaves of rye (Secale cereale L. cv. Kustro) show a heterogeneous, tissue-specific pattern of flavonoids being composed of the two C-glycosylflavone glycosides isovitexin 2"-0-arabinoside and isovitexin 2"-0-galactoside (located in the epidermal layers) [1, 2], the two flavone glycosides luteolin 7O-diglucuronide and luteolin 7-O-diglucuronide 4'O-glucuronide [3] and the two anthocyanin...

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Cultivar and year-to-year variation of phytosterol content in rye (Secale cereale L.).

Intake of phytosterols (and -stanols) has been shown to decrease the level of low-density lipoprotein cholesterol and thus protect against development of cardiovascular diseases. Therefore, studies on the cultivar and year-to-year variation in phytosterol content in rye grains have been performed. The phytosterol content and composition of different rye cultivars, grown under identical conditio...

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ژورنال

عنوان ژورنال: BMC Plant Biology

سال: 2011

ISSN: 1471-2229

DOI: 10.1186/1471-2229-11-131